Output     < 3 of 6 >

After finishing the calculation, the output page will appear with the pocket details and resubmission on the left and the pocket visualizations on the right.

1. The pocket details on the left describe the protein title (if known from the file) and the ligand and pocket properties. These properties can be resubmitted by opening the options when you click on "change >>".	2. The list of pocket components and their number.
3. You can download the pocket in PDB file format or email the pocket as an attachment.	4. Color schemes for the pocket sequence view: Components - the residues are colored by their pocket component type Distance - the residues are colored by their distance from the ligand Charge - the residues are colored by their residue charge type Structure - the residues are colored by their secondary structure Direction - the residues are colored by their sidechain or backbone direction towards the ligand
5. Click on "3D view" to open the Jmol applet window.	6. The protein sequence is displayed in several lines, while the pocket residues are indicated above these lines as boxes at their sequence locations. The boxes can be colored by several color and hovering over them will open a window with the residue's details.